Installation

This guide will walk you through creating an isolated environment and installing the package.

If you instead want to set up a new installation for development see the installation instructions in the `contributing guidelines <../../CONTRIBUTING.md>’_.

Note: We do not currently support Windows, to use Synthesizer on Windows please install the Windows Subsystem for Linux (WSL).

Creating a python environment

First create a virtual python environment. Synthesizer has been tested with Python 3.10, 3.11, 3.12, and 3.13. You should replace this path with where you wish to install your virtual environment:

python3 -m venv /path_to_new_virtual_environment
source /path_to_new_virtual_environment/bin/activate

Installing from source

To install the latest unstable version from source, clone the repository and install the package from the root directory:

git clone https://github.com/synthesizer-project/synthesizer.git
cd synthesizer
pip install .

Installing with Optional Configuration Options

Synthesizer provides several optional configuration options that can be set at installation time. These options can be set by setting environment variables prior to installation. Below we detail the most important of these options.

For a full list of configuration options and their possible values see the configuration options docs.

Installing with OpenMP support

DISCLAIMER: This section is only important if you want to make use of shared memory parallelism for large calculations.

To make use of synthesizer’s shared memory parallelism you must first have OpenMP installed on your system. Most compilers come with OpenMP baked in with a few exceptions. This means installation with OpenMP is as simple as setting a flag at installation:

WITH_OPENMP=1 pip install .

On Linux this approach should be sufficient in almost all cases.

On OSX OpenMP must be installed via homebrew and setuptools appears to struggle automatically finding the install location. In this situation, and any others where the automatic locating of OpenMP fails, the path to the installation can be stated explicitly:

WITH_OPENMP=/opt/homebrew/Cellar/libomp/18.1.6/ pip install .

Note that the path should point to the directory containing the include and lib directories.

Optional Dependencies

Synthesizer provides several optional dependency groups to cater to different use cases. These groups can be installed directly from PyPI using the following syntax:

pip install cosmos-synthesizer[<group>]

Or when installing from source:

pip install .[<group>]

The available groups are:

  • Development (dev): Tools to help developing including linting and formatting.

  • Testing (test): Frameworks and utilities for running tests.

  • Documentation (docs): Packages required to build the project documentation.

  • Simulation-specific loaders: Additional libraries required for loading certain simulation data: - bluetides: For working with Bluetides simulation files. - eagle: For working with Eagle simulation files.

For example, to install with development dependencies, run:

pip install cosmos-synthesizer[dev]

Multiple optional dependency groups can be installed in one command. For instance, to install both the testing and documentation dependencies, run:

pip install cosmos-synthesizer[test,docs]